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Trans-eQTLs across different cancer types

In trans-eQTL analysis, we identified 231,210 eQTL−gene pairs at FDR < 0.05 in 33 cancer types for users to search or browse.

     

e.g., "PRAD"
e.g., "rs7231881"
e.g., "SMAD4"


     

Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
Gene symbol
Gene position (hg19)
Beta
t-stat
p-valule
Display
THCA rs6462446 chr7:33053281 A/G FKBP9L chr7:55748767-55780945:- -0.42 -9.48 1.15E-19 Box Plot
THCA rs6462448 chr7:33058184 C/T FKBP9L chr7:55748767-55780945:- 0.4 9.02 4.66E-18 Box Plot
THCA rs6462449 chr7:33073329 A/C FKBP9L chr7:55748767-55780945:- 0.4 9.02 4.66E-18 Box Plot
THCA rs6462450 chr7:33074356 C/T FKBP9L chr7:55748767-55780945:- 0.41 7.62 1.36E-13 Box Plot
THCA rs6462453 chr7:33078698 T/G FKBP9L chr7:55748767-55780945:- 0.34 7.15 3.23E-12 Box Plot
THCA rs6462455 chr7:33109186 G/A FKBP9L chr7:55748767-55780945:- 0.4 9.05 3.7E-18 Box Plot
THCA rs6462456 chr7:33109851 A/G FKBP9L chr7:55748767-55780945:- 0.4 8.95 8.18E-18 Box Plot
THCA rs6462459 chr7:33124005 A/G FKBP9L chr7:55748767-55780945:- 0.37 6.66 7.39E-11 Box Plot
THCA rs6463535 chr7:6295539 T/C FAM63B chr15:59063391-59154099:+ 0.24 5.88 7.89E-9 Box Plot
THCA rs6464773 chr7:140145558 G/T LOC441455 chr9:99488103-99489749:+ -0.46 -6.21 1.16E-9 Box Plot
THCA rs6464779 chr7:140157830 C/T LOC441455 chr9:99488103-99489749:+ 0.5 6.86 2.09E-11 Box Plot
THCA rs6468311 chr8:30219387 A/G ARMC2 chr6:109169619-109295675:+ -0.37 -5.94 5.42E-9 Box Plot
THCA rs6470455 chr8:127678907 A/G C15orf21 chr15:45803334-45848928:+ -0.49 -8.02 8.45E-15 Box Plot
THCA rs6470455 chr8:127678907 A/G NEDD8 chr14:24686058-24701660:- -0.21 -6.08 2.42E-9 Box Plot
THCA rs6470455 chr8:127678907 A/G POLR2I chr19:36604612-36606248:- -0.18 -6.39 4.02E-10 Box Plot